from typing import Optional
import diffrax
import jax.numpy as jnp
import numpy as np
from eulerpi.core.models import ArtificialModelInterface, JaxModel
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def heat_rhs(t: float, u: jnp.ndarray, args: tuple | list) -> jnp.ndarray:
"""Right hand side of the heat equation.
Args:
t (float): time at which the right hand side is evaluated
u (jnp.ndarray): current solution of the heat equation
args (tuple | list): tuple of the form (dx, dy, param) with dx, dy the spatial discretization and param the thermal conductivity matrix, given as a vector of length 3 with param[0] = kappa_11, param[1] = kappa_22, param[2] = kappa_12
Returns:
jnp.ndarray: right hand side of the heat equation
"""
dx = args[0]
dy = args[1]
param = args[2]
# use the central difference scheme to approximate the derivatives. Gradient preserves the size of the array by using one-sided differences. We throw away the boundary points later.
du_dx = jnp.gradient(u, dx, axis=0)
du_dx2 = (u[2:, 1:-1] - 2 * u[1:-1, 1:-1] + u[:-2, 1:-1]) / dx**2
du_dy2 = (u[1:-1, 2:] - 2 * u[1:-1, 1:-1] + u[1:-1, :-2]) / dy**2
du_dx_dy = jnp.gradient(du_dx, dy, axis=1)
# compute the right hand side of the heat equation
rhs = jnp.zeros(u.shape)
rhs = rhs.at[1:-1, 1:-1].set(
param[0] * du_dx2
+ param[1] * du_dy2
+ 2 * param[2] * du_dx_dy[1:-1, 1:-1]
)
return rhs
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class Heat(JaxModel):
"""A two-dimensional anisotropic heat conduction equation model on a square domain with four dirichlet boundaries.
The model is defined by the following partial differential equation on the square spacial domain :math:`\\Omega = [0, 1]^2` on the time interval :math:`[0, 0.1]`:
.. math::
\\frac{\\partial u}{\\partial t} = \\nabla \\cdot \\left( \\kappa \\nabla u \\right)
subject to
.. math::
u(x, y, t=0) = 0
and
.. math::
u(0, y, t) = 1, \\quad u(1, y, t) = 0, \\quad u(x, 0, t) = 1, \\quad u(x, 1, t) = 0
with the symmetric positive definite thermal conductivity matrix :math:`\\kappa` and the temperature :math:`u`.
Inference is performed on the entries of :math:`\\kappa`: param[0] = :math:`\\kappa_{11}`, param[1] = :math:`\\kappa_{22}`, param[2] = :math:`\\kappa_{12}`.
"""
t_end = 0.1 #: End time of the simulation
plate_length = jnp.array([1.0, 1.0]) #: Length of the square plate
num_grid_points = 20 #: Number of grid points in each spatial direction
param_dim = 3 #: Number of independent heat conductivity parameters
data_dim = 5 #: The values of the heat equation solution at five points are observed. See evaluation_points.
evaluation_points = jnp.array(
[
[0.25, 0.25],
[0.75, 0.25],
[0.5, 0.5],
[0.25, 0.75],
[0.75, 0.75],
]
)
CENTRAL_PARAM = np.array([1.5, 1.5, 0.5])
PARAM_LIMITS = np.array([[1.0, 2.0], [1.0, 2.0], [0.0, 1.0]])
def __init__(
self,
central_param: np.ndarray = CENTRAL_PARAM,
param_limits: np.ndarray = PARAM_LIMITS,
name: Optional[str] = None,
**kwargs,
) -> None:
"""Default constructor for the heat model.
Args:
central_param (np.ndarray, optional): Central parameter within the parameter domain, where the density is non-zero. Defaults to CENTRAL_PARAM.
param_limits (np.ndarray, optional): Maximum parameter limits for sampling or grid-based inference. The parameter domain is contained within the box given by param_limits. Defaults to PARAM_LIMITS.
name (Optional[str], optional): Name for the model. Defaults to None means the model name is "heat".
"""
super().__init__(central_param, param_limits, name=name, **kwargs)
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@classmethod
def forward(cls, param: np.ndarray) -> np.ndarray:
"""Forward method for the heat model.
Yields the solution of the anisotropic heat conduction equation at time :math:`t=0.1`
in five spatial points, which are arranged similar to the number "five" on a dice.
Args:
param (np.ndarray): Entries of the conductivity matrix: param[0] = :math:`\\kappa_{11}`, param[1] = :math:`\\kappa_{22}`, param[2] = :math:`\\kappa_{12}`
Returns:
np.ndarray: The solution of the anisotropic heat conduction equation at time :math:`t=0.1`
in five spacial points, which are arranged similar to the number "five" on a dice.
"""
solution = cls.perform_simulation(kappa=param)
# linearly interpolate the solution at the evaluation points, use own interpolation function as jax doesn't support scipy.interpolate.interp2d and doesn't provide a 2d interpolation function
x = jnp.linspace(0, cls.plate_length[0], cls.num_grid_points)
y = jnp.linspace(0, cls.plate_length[1], cls.num_grid_points)
# compute the indices between which the evaluation points lie
x_indices = jnp.searchsorted(x, cls.evaluation_points[:, 0]) - 1
y_indices = jnp.searchsorted(y, cls.evaluation_points[:, 1]) - 1
dx = cls.plate_length[0] / cls.num_grid_points
dy = cls.plate_length[1] / cls.num_grid_points
# interpolate the solution at the evaluation points
solution_at_evaluation_points = (1 / (dx * dy)) * (
solution[x_indices, y_indices]
* (x[x_indices + 1] - cls.evaluation_points[:, 0])
* (y[y_indices + 1] - cls.evaluation_points[:, 1])
+ solution[x_indices + 1, y_indices]
* (cls.evaluation_points[:, 0] - x[x_indices])
* (y[y_indices + 1] - cls.evaluation_points[:, 1])
+ solution[x_indices, y_indices + 1]
* (x[x_indices + 1] - cls.evaluation_points[:, 0])
* (cls.evaluation_points[:, 1] - y[y_indices])
+ solution[x_indices + 1, y_indices + 1]
* (cls.evaluation_points[:, 0] - x[x_indices])
* (cls.evaluation_points[:, 1] - y[y_indices])
)
return solution_at_evaluation_points
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def param_is_within_domain(self, param: np.ndarray) -> bool:
"""Checks whether a parameter is within the parameter domain of the model.
This condition stems from thermodynamical considerations.
Args:
param(np.ndarray): The parameter to check.
Returns:
bool: True if the parameter is within the limits.
"""
return param[0] * param[1] > param[2] ** 2
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class HeatArtificial(Heat, ArtificialModelInterface):
CENTRAL_PARAM = np.array([1.5, 1.5, 0.5])
PARAM_LIMITS = np.array([[1.0, 2.0], [1.0, 2.0], [0.0, 1.0]])
num_grid_points = 20
def __init__(
self,
central_param: np.ndarray = CENTRAL_PARAM,
param_limits: np.ndarray = PARAM_LIMITS,
name: Optional[str] = None,
**kwargs,
) -> None:
"""Default constructor for the artificial heat model.
Args:
central_param (np.ndarray, optional): Central parameter within the parameter domain, where the density is non-zero. Defaults to CENTRAL_PARAM.
param_limits (np.ndarray, optional): Maximum parameter limits for sampling or grid-based inference. The parameter domain is contained within the box given by param_limits. Defaults to PARAM_LIMITS.
name (Optional[str], optional): Name for the model. Defaults to None means the model name is "heat".
"""
super().__init__(central_param, param_limits, name=name, **kwargs)
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def generate_artificial_params(
self, num_samples: int, independent_params: bool = True
) -> np.ndarray:
"""Generates a set of viable parameter samples for the heat model.
Args:
num_samples (int): Number of samples to generate.
independent_params (bool, optional): Whether the parameters should be independent. Defaults to True.
Returns:
np.ndarray: A set of viable parameter samples.
"""
param_spans = self.param_limits[:, 1] - self.param_limits[:, 0]
lower_bounds = self.param_limits[:, 0] + 0.2 * param_spans
upper_bounds = self.param_limits[:, 1] - 0.2 * param_spans
true_param_sample = lower_bounds + (
upper_bounds - lower_bounds
) * np.random.beta(a=2, b=5, size=(num_samples, self.param_dim))
return true_param_sample